Protein Sequence Databases

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Protein domain families: databases and search tools
       InterPro - integration of Pfam, PRINTS, PROSITE, SWISS-PROT + TrEMBL    - http://www.ebi.ac.uk/interpro/
       PSORT - prediction of protein sorting signals    - http://psort.nibb.ac.jp/index.html
       Pfam - alignments and hidden Markov models covering many common protein domains    - http://www.sanger.ac.uk/Software/Pfam/index.shtml
       SMART - analysis of domains in proteins -    http://smart.embl-heidelberg.de/
       ProDom - protein domain database    - http://prodes.toulouse.inra.fr/prodom/current/html/home.php
       PROSITE - database of protein families and domains    - http://us.expasy.org/prosite/
       PRINTS - groups of conserved motifs used to characterise protein families    - http://umber.sbs.man.ac.uk/dbbrowser/PRINTS/
       ProfileScan - scans sequence against profile databases    - http://myhits.isb-sib.ch/cgi-bin/motif_scan

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