Genome Databases
From Biocourse
Mouse
EUCIB Mouse Backcross Database (MBx) - http://www.hgmp.mrc.ac.uk/MBx/MBxHomepage.html
MGI (Mouse Genome Information) - http://www.informatics.jax.org/
Mouse Cytogenetic Map Image - http://ws4.niai.affrc.go.jp/dbsearch2/mmap/mmap.html
Portable Dictionary of the Mouse Genome - http://www.nervenet.org/main/dictionary.html
Rat
RATMAP - http://ratmap.gen.gu.se/
Whitehead Institute/MIT Genome Center Rat SSLP Data - http://www-genome.wi.mit.edu:80/ftp/distribution/rat_sslp_releases/
Animal
National Animal Genome Research Program - http://www.animalgenome.org/
ArkDB - http://www.thearkdb.org/
Cow
Japan Cattle Cytogenetic Map - http://ws4.niai.affrc.go.jp/dbsearch2/cmap/cmap.html
Pig
NAGRP Pig Gene Map - http://www.public.iastate.edu/~pigmap/pigmap.html
Roslin PiGMaP Data - http://www.ri.bbsrc.ac.uk/pigmap/pigmap.html
Pig Cytogenetic Map (Japan) - http://ws4.niai.affrc.go.jp/dbsearch2/pmap/pmap.html
Chicken
NAGRP Chicken Gene Map - http://poultry.mph.msu.edu/
Dog
The Dog Genome Project - http://mendel.berkeley.edu/dog.html
Zebra fish
The Zebra Fish Server - http://zfish.uoregon.edu/
Mosquito
Mosquito genomic database - http://mosquito.colostate.edu/tikiwiki/tiki-index.php
Drosophila
FlyDB - http://flybase.bio.indiana.edu/
FlyView - A Drosophila Image Database - http://pbio07.uni-muenster.de/
Other Insects
Sericultural Science, the University of Tokyo - http://papilio.ab.a.u-tokyo.ac.jp/
Caenorhabditis elegans
Caenorhabditis elegans WWW Server at UTSW - http://eatworms.swmed.edu/
wEST C. elegans Expressed Sequence Tag Database - gopher://gopher.gdb.org/77/.INDEX/west
C. elegans repetitive DNA - http://ibc.wustl.edu/rpt/elegans
The Worm Web - http://sunflower.bio.indiana.edu
Rose Worm Lab - http://genekit.medgen.ubc.ca/
Fungal
Saccharomyces genomic database - http://genome-www.stanford.edu/
Yeast Protein Database (YPD) - http://www.proteome.com/YPDhome.html
Candida albicans - http://alces.med.umn.edu/Candida.html
Eschericia coli
EcoCyc: Encyclopedia of E. coli Genes and Metabolism - http://www.ecocyc.org/
Other Prokaryotes
Normalized Gene Designation Database (NGDD) - http://www.hgmp.mrc.ac.uk/local-data/Ngdd_form.html
Organellar
NCBI Organelle Genome Resources - http://www.ncbi.nlm.nih.gov/genomes/ORGANELLES/organelles.html
Plant
AAtDB at Harvard U. - http://weeds.mgh.harvard.edu/index.html
MaizeDB Maize Genome Database - http://www.agron.missouri.edu/
Comparative
HOVERGEN (Database of Homologous Vertebrate Genes) - http://pbil.univ-lyon1.fr/databases/hovergen.html
The dysmorphic human and mouse homology database - http://www.hgmp.mrc.ac.uk/DHMHD/dysmorph.html
XLocus - http://cgsc.biology.yale.edu/xlocus.html
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EUCIB Mouse Backcross Database (MBx) - http://www.hgmp.mrc.ac.uk/MBx/MBxHomepage.html MGI (Mouse Genome Information) - http://www.informatics.jax.org/ Mouse Cytogenetic Map Image - http://ws4.niai.affrc.go.jp/dbsearch2/mmap/mmap.html Portable Dictionary of the Mouse Genome - http://www.nervenet.org/main/dictionary.html RATMAP - http://ratmap.gen.gu.se/ Whitehead Institute/MIT Genome Center Rat SSLP Data - http://www-genome.wi.mit.edu:80/ftp/distribution/rat_sslp_releases/ http://www.animalgenome.org/ ArkDB - http://www.thearkdb.org/
OMIM (Mendelian Inheritance in Man) - http://www3.ncbi.nlm.nih.gov/Omim/ GDB(Human Genome Data Base) - http://gdbwww.gdb.org/ TIGR database - http://www.tigr.org/tdb/index.shtml EUCIB Mouse Backcross Database (MBx) - http://www.hgmp.mrc.ac.uk/MBx/MBxHomepage.html MGI (Mouse Genome Information) - http://www.informatics.jax.org/ Mouse Cytogenetic Map Image - http://ws4.niai.affrc.go.jp/dbsearch2/mmap/mmap.html Portable Dictionary of the Mouse Genome - http://www.nervenet.org/main/dictionary.html RATMAP - http://ratmap.gen.gu.se/ Whitehead Institute/MIT Genome Center Rat SSLP Data - http://www-genome.wi.mit.edu:80/ftp/distribution/rat_sslp_releases/ http://www.animalgenome.org/ ArkDB - http://www.thearkdb.org/
